This is a how-to guide for collecting MLDN metadata.
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The information below can also be viewed as a Microsoft Word document here.

EML Metadata

Highlighted elements are required. Definitions and guidance for each metadata element can be found on the GBIF IPT User Manual, on this page

Dataset shortname (will be the URL in the IPT, all lower case, no spaces):
Title:
Update Frequency (pick one): Daily, Weekly, Monthly, Biannually, Annually, As Needed, Continually, Irregular, Not Planned, Unknown, Other Maintenance Period
Data License (pick one): CC-0, CC-BY, CC-BY-NC
Description / Abstract:
Resource Contacts (include First Name, Last Name, Position, Organization, Email, can link to ORCID):
Resource Creators (include First Name, Last Name, Position, Organization, Email, can link to ORCID):
Metadata Providers (include First Name, Last Name, Position, Organization, Email, can link to ORCID):

Geographic Coverage

Set global coverage: YES or NO (if NO rest is required)
Description:
West (decimal degrees):
East (decimal degrees):
South (decimal degrees):
North (decimal degrees):

Taxonomic Coverage

Description:
Scientific Name, Common Name, Taxon Rank for all species or at higher level if all part of one higher level rank

Temporal Coverage

Temporal Coverage Type (can select more than one but corresponding information must align with the type): Single Date, Formation Period, Date Range, Living Time Period

Keywords

Thesaurus / Vocabulary:
Keyword List:

Associated Parties

Associated Party (include First Name, Last Name, Position, Organization, Email, can link to ORCID):
Associated Party Role (pick one per person from table below):
Role information is also available at https://ipt.gbif.org/manual/en/ipt/latest/manage-resources#associated-parties.

Role Description
author an agent who is an author of a publication that used the dataset, or author of a data paper
contentProvider an agent who contributed content to a dataset (the dataset being described may be a composite)
custodianSteward an agent who is responsible for/takes care of the dataset
distributor an agent involved in the publishing/distribution chain of a dataset
editor an agent associated with editing a publication that used the dataset, or a data paper
metadataProvider an agent responsible for providing the metadata
originator an agent who originally gathered/prepared the dataset
owner an agent who owns the dataset (may or may not be the custodian)
pointOfContact an agent to contact for further information about the dataset
principalInvestigator a primary scientific contact associated with the dataset
processor an agent responsible for any post-collection processing of the dataset
publisher the agent associated with the publishing of some entity (paper, article, book, etc) based on the dataset, or of a data paper
user an agent that makes use of the dataset
programmer an agent providing informatics/programming support related to the dataset
curator an agent that maintains and documents the specimens in a collection. Some of their duties include preparing and labeling specimens so they are ready for identification, and protecting the specimens
reviewer person assigned to review the dataset and verify its data and/or metadata quality. This role is analogous to the role played by peer reviewers in the scholarly publication process.

Note: Stephen Formel will be listed as the publisher if he loads the data into the Integrated Publishing Toolkit (IPT) for you and shares to GBIF and/or OBIS.

For IOOS Regional Associations
All IOOS Regional Association affiliated datasets should include at least one Associated Party which lists the proper RA. The RA names must appear the same as they are listed in OceanExpert. This allows the dataset to show up on the Regional Association’s institutional dashboard. The metrics for all linked datasets will be tracked on this dashboard.

Regional Association OceanExpert OBIS Institute ROR
Alaska Ocean Observing System      
Caribbean Coastal Ocean Observing System https://oceanexpert.org/institution/16063 https://obis.org/institute/16063  
Central & Northern California Ocean Observing System https://oceanexpert.org/institution/23204 https://obis.org/institute/23204  
Great Lakes Observing System     https://ror.org/036ftwn63
Gulf of Mexico Coastal Ocean Observing System https://oceanexpert.org/institution/18936 https://obis.org/institute/18936  
Mid-Atlantic Coastal Ocean Observing System      
Northeastern Regional Association of Coastal Ocean Observing Systems https://oceanexpert.org/institution/18301 https://obis.org/institute/18301 https://ror.org/05ackpy69
Northwest Association of Networked Ocean Observing Systems      
Pacific Islands Ocean Observing System https://oceanexpert.org/institution/20188 https://obis.org/institute/20188  
Southern California Coastal Ocean Observing System      
Southeast Coastal Ocean Observing System https://oceanexpert.org/institution/20875 https://obis.org/institute/20875  

For MBON
All US MBON affiliated datasets should include at least one Associated Party which is affiliated with US MBON. This allows the dataset to show up on the US MBON institutional dashboard. The metrics for your dataset will be tracked on this dashboard and combined with other MBON dataset metrics. This is possible because US MBON has an OceanExpert institute which links the various datasets together on the institute page.

United States Marine Biodiversity Observation Network
OceanExpert: https://oceanexpert.org/institution/23070
OBIS Institute: https://obis.org/institute/23070

Note: Mathew Biddle will be listed as the distributor with US MBON as the institution.

Appendices
To create an OceanExpert institution, follow the Appendix: How-to Create an OceanExpert Institution.

NOAA and IOOS DMAC encourage the use of Research Organization Registry identifiers for organizations and institutions.
See the Appendix: More Information on ROR Identifiers.

Project Data

If including this section Title and Project Personnel are required

Title:
Identifier
Description:
Funding:
Study Area Description:
Design Description:
Project Personnel (First Name, Last Name, Role):

Sampling Methods

If including this section Study Extent, Sampling Description, Step Description are required)

Study Extent:
Sampling Description:
Quality Control:
Step Description:

Citations

Resource Citation (can be autogenerated):
Resource Citation Identifier:
Bibliographic Citations:

Collection Data

Collections:
Specimen Preservation Methods:
Curatorial Units:

Resource Homepage:
Other Data Formats (Name, Character Set, Download URL, Data Format, Data Format Version):

Additional Metadata

Resource Logo URL (or file upload):
Purpose:
Maintenance Description:
Additional Information:
Alternative Identifiers:

Appendix: How to create an OceanExpert institution

Before creating a new institution it’s always good to first do a search to make sure your institution doesn’t already exist in OceanExpert. You can search for institutions at https://oceanexpert.org/advancedSearch. Be sure to check various spellings and acronyms too!

To create an OceanExpert institution:

  1. Create an OceanExpert account: https://oceanexpert.org/register
  2. Once your account is created, log in and edit your profile:
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  3. In the Affiliation and Address section of the profile there is a dropdown menu for Organisation/Institution/Company, select the first option Cannot find my Institute - Create New:
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  4. A new window will pop up and ask you to populate a new institution record:
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    1. The only required fields are: Name, Type (choose from Academic, Government, International / Intergovernmental, NGO, Private Commercial, Private non-profit, and Research), Address, Zip Code, and City.
  5. Click Add Institution.
  6. That should add the institution to the drop down list for Organisation/Institution/Company so that you can associate it with your profile.

To edit OceanExpert institution pages, send an email to info@oceanexpert.org with the requested changes.

Appendix: More information on ROR identifiers

NOAA and IOOS DMAC encourage the use of Research Organization Registry (ROR) identifiers for institutions, but the current implementation of OBIS uses OceanExpert to create the institutional dashboard. For more information about ROR identifiers and IOOS recommendations, see the August 2024 DMAC tech webinar recording. The documentation here regarding institution identifiers will be updated with new guidance when advances are made in linking RORs to OceanExpert identifiers and if RORs are implemented in other relevant repositories for IOOS marine life data.

Tags: metadata eml